HL_7P48_033
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P48_033 not in the Motif Atlas
- Homologous match to HL_4WF9_032
- Geometric discrepancy: 0.0899
- The information below is about HL_4WF9_032
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 137
Unit IDs
7P48|1|A|G|1318
7P48|1|A|U|1319
7P48|1|A|G|1320
7P48|1|A|A|1321
7P48|1|A|G|1322
7P48|1|A|A|1323
7P48|1|A|A|1324
7P48|1|A|U|1325
7P48|1|A|C|1326
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L17
- Chain Q
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
Coloring options: