HL_7P48_036

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7P48|1|A|U|1433, 7P48|1|A|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P48_036 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.0954

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7P48|1|A|G|1426
7P48|1|A|U|1427
7P48|1|A|U|1428
7P48|1|A|G|1429
7P48|1|A|A|1430
7P48|1|A|U|1431
7P48|1|A|A|1432
7P48|1|A|U|1433
7P48|1|A|U|1434
7P48|1|A|C|1435

Current chains

Chain A

23S rRNA

Nearby chains

Chain R

50S ribosomal protein L23