HL_7P48_096

3D structure

PDB id

7P48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus ribosome in complex with Sal(B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P48_096 not in the Motif Atlas

Homologous match to HL_6CZR_098

Geometric discrepancy: 0.453

The information below is about HL_6CZR_098

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7P48|1|a|U|1175
7P48|1|a|G|1176
7P48|1|a|A|1177
7P48|1|a|C|1178
7P48|1|a|A|1179
7P48|1|a|A|1180
7P48|1|a|A|1181

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2