HL_7P48_099
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 7P48|1|a|U|1374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P48_099 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1354
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.2
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7P48|1|a|G|1366
7P48|1|a|A|1367
7P48|1|a|U|1368
7P48|1|a|C|1369
7P48|1|a|A|1370
7P48|1|a|G|1371
7P48|1|a|C|1372
7P48|1|a|A|1373
7P48|1|a|U|1374
7P48|1|a|G|1375
7P48|1|a|C|1376
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: