HL_7P7Q_006

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7P7Q|1|A|A|198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_006 not in the Motif Atlas

Geometric match to HL_5J7L_139

Geometric discrepancy: 0.0482

The information below is about HL_5J7L_139

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7P7Q|1|A|G|196
7P7Q|1|A|A|197
7P7Q|1|A|A|198
7P7Q|1|A|A|199
7P7Q|1|A|C|200
7P7Q|1|A|A|201
7P7Q|1|A|U|202
7P7Q|1|A|C|203

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15

Chain Z

50S ribosomal protein L28