HL_7P7Q_028

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7P7Q|1|A|A|1109, 7P7Q|1|A|G|1110, 7P7Q|1|A|C|1111

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_028 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.3398

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7P7Q|1|A|C|1103
7P7Q|1|A|U|1104
7P7Q|1|A|U|1105
7P7Q|1|A|A|1106
7P7Q|1|A|G|1107
7P7Q|1|A|A|1108
7P7Q|1|A|A|1109
7P7Q|1|A|G|1110
7P7Q|1|A|C|1111
7P7Q|1|A|A|1112
7P7Q|1|A|G|1113

Current chains

Chain A

23S rRNA

Nearby chains