HL_7P7Q_050
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 7P7Q|1|A|A|2043, 7P7Q|1|A|A|2044, 7P7Q|1|A|G|2045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7Q_050 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1185
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7P7Q|1|A|G|2040
7P7Q|1|A|U|2041
7P7Q|1|A|G|2042
7P7Q|1|A|A|2043
7P7Q|1|A|A|2044
7P7Q|1|A|G|2045
7P7Q|1|A|A|2046
7P7Q|1|A|U|2047
7P7Q|1|A|G|2048
7P7Q|1|A|C|2049
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain H
- 50S ribosomal protein L3
- Chain U
- 50S ribosomal protein L21
Coloring options: