HL_7P7Q_068
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGAGAUGAU
- Length
- 9 nucleotides
- Bulged bases
- 7P7Q|1|A|G|2830
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7Q_068 not in the Motif Atlas
- Homologous match to HL_5J7L_201
- Geometric discrepancy: 0.0774
- The information below is about HL_5J7L_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7P7Q|1|A|A|2829
7P7Q|1|A|G|2830
7P7Q|1|A|A|2831
7P7Q|1|A|G|2832
7P7Q|1|A|A|2833
7P7Q|1|A|U|2834
7P7Q|1|A|G|2835
7P7Q|1|A|A|2836
7P7Q|1|A|U|2837
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain H
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
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