HL_7P7Q_095

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_095 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.2424

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7P7Q|1|a|A|1039
7P7Q|1|a|G|1040
7P7Q|1|a|A|1041
7P7Q|1|a|G|1042
7P7Q|1|a|A|1043
7P7Q|1|a|U|1044

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S14 type Z

Chain t

30S ribosomal protein S19