HL_7P7Q_100

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

7P7Q|1|a|C|1194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_100 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3157

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7P7Q|1|a|U|1191
7P7Q|1|a|G|1192
7P7Q|1|a|A|1193
7P7Q|1|a|C|1194
7P7Q|1|a|A|1195
7P7Q|1|a|A|1196
7P7Q|1|a|A|1197

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S2