HL_7P7Q_103
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAUCAGCACGC
- Length
- 11 nucleotides
- Bulged bases
- 7P7Q|1|a|C|1390
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7Q_103 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1216
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.2
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|G|1382
7P7Q|1|a|A|1383
7P7Q|1|a|U|1384
7P7Q|1|a|C|1385
7P7Q|1|a|A|1386
7P7Q|1|a|G|1387
7P7Q|1|a|C|1388
7P7Q|1|a|A|1389
7P7Q|1|a|C|1390
7P7Q|1|a|G|1391
7P7Q|1|a|C|1392
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14 type Z
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