HL_7P7Q_106

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

7P7Q|1|A|A|820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_106 not in the Motif Atlas

Homologous match to HL_4WF9_024

Geometric discrepancy: 0.0963

The information below is about HL_4WF9_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

7P7Q|1|A|A|818
7P7Q|1|A|G|819
7P7Q|1|A|A|820
7P7Q|1|A|A|821
7P7Q|1|A|A|822
7P7Q|1|A|U|823
7P7Q|1|A|U|824

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2