HL_7PD3_015

3D structure

PDB id

7PD3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUUCAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PD3_015 not in the Motif Atlas

Homologous match to HL_7RQB_030

Geometric discrepancy: 0.2869

The information below is about HL_7RQB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PD3|1|A|C|2202
7PD3|1|A|G|2203
7PD3|1|A|U|2204
7PD3|1|A|U|2205
7PD3|1|A|C|2206
7PD3|1|A|A|2207
7PD3|1|A|A|2208
7PD3|1|A|G|2209

Current chains

Chain A

16S rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial