HL_7PD3_027

3D structure

PDB id

7PD3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UG(OMG)GGCG

Length

7 nucleotides

Bulged bases

7PD3|1|A|G|2817

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PD3|1|A|U|2813
7PD3|1|A|G|2814
7PD3|1|A|OMG|2815
7PD3|1|A|G|2816
7PD3|1|A|G|2817
7PD3|1|A|C|2818
7PD3|1|A|G|2819

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial

Chain x

5-methylcytosine rRNA methyltransferase NSUN4

Chain y

Transcription termination factor 4, mitochondrial

Chain z

Mitochondrial ribosome-associated GTPase 1