HL_7PJS_027

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

7PJS|1|A|U|1066, 7PJS|1|A|G|1071, 7PJS|1|A|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJS|1|A|G|1062
7PJS|1|A|G|1063
7PJS|1|A|C|1064
7PJS|1|A|U|1065
7PJS|1|A|U|1066
7PJS|1|A|A|1067
7PJS|1|A|G|1068
7PJS|1|A|A|1069
7PJS|1|A|A|1070
7PJS|1|A|G|1071
7PJS|1|A|C|1072
7PJS|1|A|A|1073
7PJS|1|A|G|1074
7PJS|1|A|C|1075
7PJS|1|A|C|1076

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L11