HL_7PJS_072
3D structure
- PDB id
- 7PJS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- AGAAGCUUGCUUCU
- Length
- 14 nucleotides
- Bulged bases
- 7PJS|1|a|A|80, 7PJS|1|a|C|83, 7PJS|1|a|U|85, 7PJS|1|a|C|87
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJS_072 not in the Motif Atlas
- Homologous match to HL_6CZR_073
- Geometric discrepancy: 0.3747
- The information below is about HL_6CZR_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PJS|1|a|A|78
7PJS|1|a|G|79
7PJS|1|a|A|80
7PJS|1|a|A|81
7PJS|1|a|G|82
7PJS|1|a|C|83
7PJS|1|a|U|84
7PJS|1|a|U|85
7PJS|1|a|G|86
7PJS|1|a|C|87
7PJS|1|a|U|88
7PJS|1|a|U|89
7PJS|1|a|C|90
7PJS|1|a|U|91
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: