HL_7PJS_081

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7PJS|1|a|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJS_081 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1419

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

7PJS|1|a|C|419
7PJS|1|a|U|420
7PJS|1|a|U|421
7PJS|1|a|C|422
7PJS|1|a|G|423
7PJS|1|a|G|424

Current chains

Chain a

16S ribosomal RNA

Nearby chains