HL_7PJS_083

3D structure

PDB id

7PJS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJS_083 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2419

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7PJS|1|a|G|521
7PJS|1|a|C|522
7PJS|1|a|A|523
7PJS|1|a|G|524
7PJS|1|a|C|525
7PJS|1|a|C|526
7PJS|1|a|G7M|527
7PJS|1|a|C|528

Current chains

Chain a

16S ribosomal RNA

Nearby chains