HL_7PJT_047

3D structure

PDB id

7PJT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CG(PSU)AACA(PSU)AACGG

Length

13 nucleotides

Bulged bases

7PJT|1|A|A|1913, 7PJT|1|A|C|1914, 7PJT|1|A|A|1916, 7PJT|1|A|A|1919

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJT|1|A|C|1909
7PJT|1|A|G|1910
7PJT|1|A|PSU|1911
7PJT|1|A|A|1912
7PJT|1|A|A|1913
7PJT|1|A|C|1914
7PJT|1|A|A|1916
7PJT|1|A|PSU|1917
7PJT|1|A|A|1918
7PJT|1|A|A|1919
7PJT|1|A|C|1920
7PJT|1|A|G|1921
7PJT|1|A|G|1922

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain w

Transfer RNA; tRNA