3D structure

PDB id
7PJW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
UUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAA
Length
80 nucleotides
Bulged bases
7PJW|1|A|G|2128, 7PJW|1|A|U|2132, 7PJW|1|A|G|2133, 7PJW|1|A|A|2171, 7PJW|1|A|U|2172
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJW|1|A|U|2105
7PJW|1|A|U|2106
7PJW|1|A|G|2107
7PJW|1|A|A|2108
7PJW|1|A|U|2109
7PJW|1|A|G|2110
7PJW|1|A|U|2111
7PJW|1|A|G|2112
7PJW|1|A|U|2113
7PJW|1|A|A|2114
7PJW|1|A|G|2115
7PJW|1|A|G|2116
7PJW|1|A|A|2117
7PJW|1|A|U|2118
7PJW|1|A|A|2119
7PJW|1|A|G|2120
7PJW|1|A|G|2121
7PJW|1|A|U|2122
7PJW|1|A|G|2123
7PJW|1|A|G|2124
7PJW|1|A|G|2125
7PJW|1|A|A|2126
7PJW|1|A|G|2127
7PJW|1|A|G|2128
7PJW|1|A|C|2129
7PJW|1|A|U|2130
7PJW|1|A|U|2131
7PJW|1|A|U|2132
7PJW|1|A|G|2133
7PJW|1|A|A|2134
7PJW|1|A|A|2135
7PJW|1|A|G|2136
7PJW|1|A|U|2137
7PJW|1|A|G|2138
7PJW|1|A|U|2139
7PJW|1|A|G|2140
7PJW|1|A|G|2141
7PJW|1|A|A|2142
7PJW|1|A|C|2143
7PJW|1|A|G|2144
7PJW|1|A|C|2145
7PJW|1|A|C|2146
7PJW|1|A|A|2147
7PJW|1|A|G|2148
7PJW|1|A|U|2149
7PJW|1|A|C|2150
7PJW|1|A|U|2151
7PJW|1|A|G|2152
7PJW|1|A|C|2153
7PJW|1|A|A|2154
7PJW|1|A|U|2155
7PJW|1|A|G|2156
7PJW|1|A|G|2157
7PJW|1|A|A|2158
7PJW|1|A|G|2159
7PJW|1|A|C|2160
7PJW|1|A|C|2161
7PJW|1|A|G|2162
7PJW|1|A|A|2163
7PJW|1|A|C|2164
7PJW|1|A|C|2165
7PJW|1|A|U|2166
7PJW|1|A|U|2167
7PJW|1|A|G|2168
7PJW|1|A|A|2169
7PJW|1|A|A|2170
7PJW|1|A|A|2171
7PJW|1|A|U|2172
7PJW|1|A|A|2173
7PJW|1|A|C|2174
7PJW|1|A|C|2175
7PJW|1|A|A|2176
7PJW|1|A|C|2177
7PJW|1|A|C|2178
7PJW|1|A|C|2179
7PJW|1|A|U|2180
7PJW|1|A|U|2181
7PJW|1|A|U|2182
7PJW|1|A|A|2183
7PJW|1|A|A|2184

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain g
30S ribosomal protein S7
Chain k
30S ribosomal protein S11
Chain v
Transfer RNA; tRNA

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0953 s