HL_7PJW_072
3D structure
- PDB id
- 7PJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AGAAGCUUGCUUCU
- Length
- 14 nucleotides
- Bulged bases
- 7PJW|1|a|A|80, 7PJW|1|a|U|85, 7PJW|1|a|C|87, 7PJW|1|a|U|89
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJW_072 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.2286
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7PJW|1|a|A|78
7PJW|1|a|G|79
7PJW|1|a|A|80
7PJW|1|a|A|81
7PJW|1|a|G|82
7PJW|1|a|C|83
7PJW|1|a|U|84
7PJW|1|a|U|85
7PJW|1|a|G|86
7PJW|1|a|C|87
7PJW|1|a|U|88
7PJW|1|a|U|89
7PJW|1|a|C|90
7PJW|1|a|U|91
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: