HL_7PJW_073

3D structure

PDB id

7PJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

7PJW|1|a|A|160

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJW_073 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.2051

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7PJW|1|a|G|158
7PJW|1|a|G|159
7PJW|1|a|A|160
7PJW|1|a|A|161
7PJW|1|a|A|162
7PJW|1|a|C|163

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain t

30S ribosomal protein S20

Chain x

Elongation factor G