HL_7PJX_073
3D structure
- PDB id
- 7PJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- UGGAAACG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJX_073 not in the Motif Atlas
- Geometric match to HL_7A0S_056
- Geometric discrepancy: 0.3778
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7PJX|1|a|U|157
7PJX|1|a|G|158
7PJX|1|a|G|159
7PJX|1|a|A|160
7PJX|1|a|A|161
7PJX|1|a|A|162
7PJX|1|a|C|163
7PJX|1|a|G|164
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: