Loop HL_7PJX

3D structure

PDB id: 7PJX (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
Experimental method: ELECTRON MICROSCOPY
Resolution: 6.5 Å

Loop

Sequence: GGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUAC
Length: 51 nucleotides
Bulged bases: 7PJX|1|A|U|2132, 7PJX|1|A|C|2145, 7PJX|1|A|C|2146, 7PJX|1|A|A|2147, 7PJX|1|A|U|2172
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7PJX|1|A|G|2124
7PJX|1|A|G|2125
7PJX|1|A|A|2126
7PJX|1|A|G|2127
7PJX|1|A|G|2128
7PJX|1|A|C|2129
7PJX|1|A|U|2130
7PJX|1|A|U|2131
7PJX|1|A|U|2132
7PJX|1|A|G|2133
7PJX|1|A|A|2134
7PJX|1|A|A|2135
7PJX|1|A|G|2136
7PJX|1|A|U|2137
7PJX|1|A|G|2138
7PJX|1|A|U|2139
7PJX|1|A|G|2140
7PJX|1|A|G|2141
7PJX|1|A|A|2142
7PJX|1|A|C|2143
7PJX|1|A|G|2144
7PJX|1|A|C|2145
7PJX|1|A|C|2146
7PJX|1|A|A|2147
7PJX|1|A|G|2148
7PJX|1|A|U|2149
7PJX|1|A|C|2150
7PJX|1|A|U|2151
7PJX|1|A|G|2152
7PJX|1|A|C|2153
7PJX|1|A|A|2154
7PJX|1|A|U|2155
7PJX|1|A|G|2156
7PJX|1|A|G|2157
7PJX|1|A|A|2158
7PJX|1|A|G|2159
7PJX|1|A|C|2160
7PJX|1|A|C|2161
7PJX|1|A|G|2162
7PJX|1|A|A|2163
7PJX|1|A|C|2164
7PJX|1|A|C|2165
7PJX|1|A|U|2166
7PJX|1|A|U|2167
7PJX|1|A|G|2168
7PJX|1|A|A|2169
7PJX|1|A|A|2170
7PJX|1|A|A|2171
7PJX|1|A|U|2172
7PJX|1|A|A|2173
7PJX|1|A|C|2174

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain g: 30S ribosomal protein S7
Chain k: 30S ribosomal protein S11
Chain v: Transfer RNA; tRNA

HL_7PJX_109