HL_7PJY_053
3D structure
- PDB id
- 7PJY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUCGGACAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJY_053 not in the Motif Atlas
- Homologous match to HL_7RQB_055
- Geometric discrepancy: 0.1513
- The information below is about HL_7RQB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11805.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7PJY|1|A|G|2303
7PJY|1|A|G|2304
7PJY|1|A|U|2305
7PJY|1|A|C|2306
7PJY|1|A|G|2307
7PJY|1|A|G|2308
7PJY|1|A|A|2309
7PJY|1|A|C|2310
7PJY|1|A|A|2311
7PJY|1|A|U|2312
7PJY|1|A|C|2313
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain w
- Transfer RNA; tRNA
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