HL_7PJY_105
3D structure
- PDB id
- 7PJY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJY_105 not in the Motif Atlas
- Homologous match to HL_1B23_002
- Geometric discrepancy: 0.3332
- The information below is about HL_1B23_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PJY|1|w|G|30
7PJY|1|w|A|31
7PJY|1|w|PSU|32
7PJY|1|w|U|33
7PJY|1|w|G|34
7PJY|1|w|A|35
7PJY|1|w|A|36
7PJY|1|w|MIA|37
7PJY|1|w|A|38
7PJY|1|w|PSU|39
7PJY|1|w|C|40
Current chains
- Chain w
- P-site fMet-Phe-tRNA(Phe)
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
- Chain x
- Elongation factor G
- Chain z
- mRNA
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