HL_7PKQ_008
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UUGAACG
- Length
- 7 nucleotides
- Bulged bases
- 7PKQ|1|2|G|189, 7PKQ|1|2|C|192
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PKQ_008 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.1943
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.8
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 23
Unit IDs
7PKQ|1|2|U|187
7PKQ|1|2|U|188
7PKQ|1|2|G|189
7PKQ|1|2|A|190
7PKQ|1|2|A|191
7PKQ|1|2|C|192
7PKQ|1|2|G|193
Current chains
- Chain 2
- S2 rRNA
Nearby chains
- Chain 1
- S1 rRNA
- Chain C
- mS45
- Chain p
- bS16m
- Chain w
- mS26
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