HL_7PNZ_010

3D structure

PDB id

7PNZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PNZ_010 not in the Motif Atlas

Geometric match to HL_4V88_207

Geometric discrepancy: 0.1251

The information below is about HL_4V88_207

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7PNZ|1|A|C|1023
7PNZ|1|A|G|1024
7PNZ|1|A|A|1025
7PNZ|1|A|A|1026
7PNZ|1|A|A|1027
7PNZ|1|A|G|1028

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain L

28S ribosomal protein S15, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial