HL_7PNZ_020

3D structure

PDB id

7PNZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UAACUAA

Length

7 nucleotides

Bulged bases

7PNZ|1|A|C|1525, 7PNZ|1|A|U|1526

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PNZ_020 not in the Motif Atlas

Geometric match to HL_5M3H_001

Geometric discrepancy: 0.2486

The information below is about HL_5M3H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7PNZ|1|A|U|1522
7PNZ|1|A|A|1523
7PNZ|1|A|A|1524
7PNZ|1|A|C|1525
7PNZ|1|A|U|1526
7PNZ|1|A|A|1527
7PNZ|1|A|A|1528

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain V

28S ribosomal protein S27, mitochondrial