HL_7PO4_009

3D structure

PDB id

7PO4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UCUUAG

Length

6 nucleotides

Bulged bases

7PO4|1|A|C|2036, 7PO4|1|A|A|2039

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO4_009 not in the Motif Atlas

Geometric match to HL_4WF9_025

Geometric discrepancy: 0.1981

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

7PO4|1|A|U|2035
7PO4|1|A|C|2036
7PO4|1|A|U|2037
7PO4|1|A|U|2038
7PO4|1|A|A|2039
7PO4|1|A|G|2040

Current chains

Chain A

16SrRNA

Nearby chains

Chain M

39S ribosomal protein L15, mitochondrial