HL_7PO4_033
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- AGGAACAGCU
- Length
- 10 nucleotides
- Bulged bases
- 7PO4|1|A|A|2110, 7PO4|1|A|G|2113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PO4_033 not in the Motif Atlas
- Homologous match to HL_5J7L_159
- Geometric discrepancy: 0.4003
- The information below is about HL_5J7L_159
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PO4|1|A|A|2106
7PO4|1|A|G|2107
7PO4|1|A|G|2108
7PO4|1|A|A|2109
7PO4|1|A|A|2110
7PO4|1|A|C|2111
7PO4|1|A|A|2112
7PO4|1|A|G|2113
7PO4|1|A|C|2114
7PO4|1|A|U|2115
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: