HL_7PTS_003

3D structure

PDB id

7PTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA origami 5-helix tile

Experimental method

ELECTRON MICROSCOPY

Resolution

5.71 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7PTS|1|A|U|77

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PTS_003 not in the Motif Atlas

Geometric match to HL_4PMI_004

Geometric discrepancy: 0.0984

The information below is about HL_4PMI_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

7PTS|1|A|C|75
7PTS|1|A|U|76
7PTS|1|A|U|77
7PTS|1|A|C|78
7PTS|1|A|G|79
7PTS|1|A|G|80

Current chains

Chain A

5HT-B

Nearby chains