HL_7PTS_014

3D structure

PDB id

7PTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNA origami 5-helix tile

Experimental method

ELECTRON MICROSCOPY

Resolution

5.71 Å

Loop

Sequence

UGAAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PTS_014 not in the Motif Atlas

Geometric match to HL_6JQ5_004

Geometric discrepancy: 0.1895

The information below is about HL_6JQ5_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7PTS|1|A|U|431
7PTS|1|A|G|432
7PTS|1|A|A|433
7PTS|1|A|A|434
7PTS|1|A|A|435
7PTS|1|A|A|436

Current chains

Chain A

5HT-B

Nearby chains