HL_7PWG_013

3D structure

PDB id

7PWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

C(OMG)UCUCGA(A2M)AC(A2M)CG

Length

14 nucleotides

Bulged bases

7PWG|1|1|C|395

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWG|1|1|C|385
7PWG|1|1|OMG|386
7PWG|1|1|U|387
7PWG|1|1|C|388
7PWG|1|1|U|389
7PWG|1|1|C|390
7PWG|1|1|G|391
7PWG|1|1|A|392
7PWG|1|1|A2M|393
7PWG|1|1|A|394
7PWG|1|1|C|395
7PWG|1|1|A2M|396
7PWG|1|1|C|397
7PWG|1|1|G|398

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain B

Ribosomal protein L3

Chain C

Ribosomal protein L4

Chain a

Ribosomal protein L27a

Chain b

60S ribosomal protein L29

Chain e

Ribosomal protein L32