HL_7PWG_015
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGAGCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWG_015 not in the Motif Atlas
- Homologous match to HL_8C3A_016
- Geometric discrepancy: 0.2066
- The information below is about HL_8C3A_016
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7PWG|1|1|C|450
7PWG|1|1|G|451
7PWG|1|1|A|452
7PWG|1|1|G|453
7PWG|1|1|C|454
7PWG|1|1|G|455
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain Q
- Ribosomal protein L18
- Chain a
- Ribosomal protein L27a
- Chain i
- Ribosomal protein L36-1
Coloring options: