HL_7PWG_052
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CAGAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWG_052 not in the Motif Atlas
- Homologous match to HL_5TBW_057
- Geometric discrepancy: 0.1833
- The information below is about HL_5TBW_057
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_93324.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 26
Unit IDs
7PWG|1|1|C|2116
7PWG|1|1|A|2117
7PWG|1|1|G|2118
7PWG|1|1|A|2119
7PWG|1|1|A|2120
7PWG|1|1|G|2121
7PWG|1|1|G|2122
7PWG|1|1|G|2123
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain D
- Ribosomal protein L5
- Chain I
- Ribosomal protein L10
- Chain T
- Ribosomal protein L21
- Chain o
- Ribosomal protein L44
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