HL_7PWG_074
3D structure
- PDB id
- 7PWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- AACUCGUUCCGAAUU
- Length
- 15 nucleotides
- Bulged bases
- 7PWG|1|3|U|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWG_074 not in the Motif Atlas
- Homologous match to HL_8OI5_068
- Geometric discrepancy: 0.1877
- The information below is about HL_8OI5_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01182.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7PWG|1|3|A|32
7PWG|1|3|A|33
7PWG|1|3|C|34
7PWG|1|3|U|35
7PWG|1|3|C|36
7PWG|1|3|G|37
7PWG|1|3|U|38
7PWG|1|3|U|39
7PWG|1|3|C|40
7PWG|1|3|C|41
7PWG|1|3|G|42
7PWG|1|3|A|43
7PWG|1|3|A|44
7PWG|1|3|U|45
7PWG|1|3|U|46
Current chains
- Chain 3
- rRNA 5S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Ribosomal protein L5
- Chain J
- Ribosomal protein L11
Coloring options: