HL_7PZY_026

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

7PZY|1|1|G|1127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PZY_026 not in the Motif Atlas

Homologous match to HL_8C3A_025

Geometric discrepancy: 0.0472

The information below is about HL_8C3A_025

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7PZY|1|1|G|1122
7PZY|1|1|G|1123
7PZY|1|1|U|1124
7PZY|1|1|A|1125
7PZY|1|1|A|1126
7PZY|1|1|G|1127
7PZY|1|1|C|1128

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain r

Ribosomal 60S subunit protein L10