HL_7PZY_065

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

UUGUUCA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PZY_065 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.0939

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7PZY|1|1|U|2892
7PZY|1|1|U|2893
7PZY|1|1|G|2894
7PZY|1|1|U|2895
7PZY|1|1|U|2896
7PZY|1|1|C|2897
7PZY|1|1|A|2898

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain k

60S ribosomal protein L3