HL_7PZY_073

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7PZY|1|1|U|3316

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PZY_073 not in the Motif Atlas

Geometric match to HL_5U30_001

Geometric discrepancy: 0.108

The information below is about HL_5U30_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7PZY|1|1|C|3315
7PZY|1|1|U|3316
7PZY|1|1|U|3317
7PZY|1|1|G|3318

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain J

40S ribosomal protein S8