HL_7PZY_096

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

7PZY|1|A|U|766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PZY_096 not in the Motif Atlas

Geometric match to HL_4TUW_002

Geometric discrepancy: 0.2774

The information below is about HL_4TUW_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

7PZY|1|A|C|762
7PZY|1|A|C|763
7PZY|1|A|U|764
7PZY|1|A|U|765
7PZY|1|A|U|766
7PZY|1|A|G|767

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain K

Ribosomal 40S subunit protein S9B

Chain Z

40S ribosomal protein S24