HL_7PZY_112
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7PZY|1|A|G|1588
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PZY_112 not in the Motif Atlas
- Geometric match to HL_4V88_220
- Geometric discrepancy: 0.2087
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7PZY|1|A|G|1581
7PZY|1|A|U|1582
7PZY|1|A|C|1583
7PZY|1|A|A|1584
7PZY|1|A|U|1585
7PZY|1|A|C|1586
7PZY|1|A|A|1587
7PZY|1|A|G|1588
7PZY|1|A|C|1589
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain e
- Ribosomal 40S subunit protein S29A
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