HL_7Q0F_092

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0F_092 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1655

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7Q0F|1|A|C|567
7Q0F|1|A|A|568
7Q0F|1|A|G|569
7Q0F|1|A|C|570
7Q0F|1|A|C|571
7Q0F|1|A|G|572

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain Y

Ribosomal 40S subunit protein S23B

Chain i

HABP4_PAI-RBP1 domain-containing protein