3D structure

PDB id
7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Candida albicans 80S ribosome in complex with anisomycin
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
CAACAG
Length
6 nucleotides
Bulged bases
7Q0P|1|1|A|72
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7Q0P_002 not in the Motif Atlas
Homologous match to HL_8C3A_002
Geometric discrepancy: 0.0412
The information below is about HL_8C3A_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_22523.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
13

Unit IDs

7Q0P|1|1|C|68
7Q0P|1|1|A|69
7Q0P|1|1|A|70
7Q0P|1|1|C|71
7Q0P|1|1|A|72
7Q0P|1|1|G|73

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain AB
Ribosomal 60S subunit protein L28
Chain AJ
60S ribosomal protein L36
Chain t
60S ribosomal protein L13
Chain v
Ribosomal protein L15

Coloring options:


Copyright 2026 BGSU RNA group. Page generated in 0.1218 s