HL_7Q0P_009
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- GGUAAAUUCC
- Length
- 10 nucleotides
- Bulged bases
- 7Q0P|1|1|G|304, 7Q0P|1|1|U|305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q0P_009 not in the Motif Atlas
- Homologous match to HL_8C3A_009
- Geometric discrepancy: 0.0435
- The information below is about HL_8C3A_009
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_15076.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7Q0P|1|1|G|303
7Q0P|1|1|G|304
7Q0P|1|1|U|305
7Q0P|1|1|A|306
7Q0P|1|1|A|307
7Q0P|1|1|A|308
7Q0P|1|1|U|309
7Q0P|1|1|U|310
7Q0P|1|1|C|311
7Q0P|1|1|C|312
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AB
- Ribosomal 60S subunit protein L28
- Chain AJ
- 60S ribosomal protein L36
- Chain AP
- Ribosomal 60S subunit protein L42A
- Chain t
- 60S ribosomal protein L13
- Chain v
- Ribosomal protein L15
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