HL_7Q0P_038

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

7Q0P|1|1|U|1683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_038 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.0873

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7Q0P|1|1|G|1676
7Q0P|1|1|U|1677
7Q0P|1|1|U|1678
7Q0P|1|1|A|1679
7Q0P|1|1|U|1680
7Q0P|1|1|C|1681
7Q0P|1|1|U|1682
7Q0P|1|1|U|1683
7Q0P|1|1|U|1684

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 5

Ribosomal 60S subunit protein L22B

Chain z

Ribosomal protein L19