HL_7Q0P_058

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_058 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.065

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7Q0P|1|1|A|2645
7Q0P|1|1|A|2646
7Q0P|1|1|C|2647
7Q0P|1|1|A|2648
7Q0P|1|1|G|2649
7Q0P|1|1|A|2650
7Q0P|1|1|A|2651
7Q0P|1|1|A|2652
7Q0P|1|1|U|2653

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain i

HABP4_PAI-RBP1 domain-containing protein

Chain s

Ribosomal 60S subunit protein L11B