HL_7Q0P_072

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GCAUACGAC

Length

9 nucleotides

Bulged bases

7Q0P|1|1|C|3269

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_072 not in the Motif Atlas

Homologous match to HL_8C3A_071

Geometric discrepancy: 0.0359

The information below is about HL_8C3A_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7Q0P|1|1|G|3268
7Q0P|1|1|C|3269
7Q0P|1|1|A|3270
7Q0P|1|1|U|3271
7Q0P|1|1|A|3272
7Q0P|1|1|C|3273
7Q0P|1|1|G|3274
7Q0P|1|1|A|3275
7Q0P|1|1|C|3276

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain k

Ribosomal 60S subunit protein L3

Chain x

Ribosomal 60S subunit protein L17B