HL_7Q0P_116

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

7Q0P|1|1|C|1268

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0P_116 not in the Motif Atlas

Geometric match to HL_8C3A_203

Geometric discrepancy: 0.2469

The information below is about HL_8C3A_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

7Q0P|1|1|G|1262
7Q0P|1|1|U|1263
7Q0P|1|1|G|1264
7Q0P|1|1|U|1265
7Q0P|1|1|A|1266
7Q0P|1|1|A|1267
7Q0P|1|1|C|1268
7Q0P|1|1|A|1269
7Q0P|1|1|A|1270
7Q0P|1|1|C|1271

Current chains

Chain 1

25S ribosomal RNA

Nearby chains