3D structure

PDB id
7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Candida albicans 80S ribosome in complex with blasticidin s
Experimental method
ELECTRON MICROSCOPY
Resolution
2.67 Å

Loop

Sequence
AUUUUGUUGGUUUCU
Length
15 nucleotides
Bulged bases
7Q0R|1|A|U|818, 7Q0R|1|A|G|819, 7Q0R|1|A|U|824
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Q0R|1|A|A|814
7Q0R|1|A|U|815
7Q0R|1|A|U|816
7Q0R|1|A|U|817
7Q0R|1|A|U|818
7Q0R|1|A|G|819
7Q0R|1|A|U|820
7Q0R|1|A|U|821
7Q0R|1|A|G|822
7Q0R|1|A|G|823
7Q0R|1|A|U|824
7Q0R|1|A|U|825
7Q0R|1|A|U|826
7Q0R|1|A|C|827
7Q0R|1|A|U|828

Current chains

Chain A
18S ribosomal RNA

Nearby chains

Chain M
Ribosomal 40S subunit protein S11A

Coloring options:

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